PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC052723.20
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family B3
Protein Properties Length: 116aa    MW: 13397.4 Da    PI: 9.8738
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC052723.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.73.2e-11599283
                  EEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTH.HHHHHHHT--TT-EEEEE CS
            B3  2 fkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesg.rsWevkliyrkksgryvltkGW.keFvkangLkegDfvvFk 83
                  +k lt+sd +  +rl + ++ +++h           + ++ ++ +++++d +   + ++ + ++ +sg+yvl++GW keFvk  gL +gD v ++
  EcC052723.20  5 KKRLTQSDLGHMSRLLIGRDSVKSHflrwmneetvrQVESSKGADVIVRDMDTcSEHRLVFVFWASSGSYVLKGGWiKEFVKRRGLAVGDEVGIY 99
                  5889************************98888877444457788999996666778888888*************999***********88777 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019363.34E-144109IPR015300DNA-binding pseudobarrel domain
CDDcd100172.21E-154112No hitNo description
Gene3DG3DSA:2.40.330.102.9E-145112IPR015300DNA-binding pseudobarrel domain
PfamPF023625.5E-8699IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0003677Molecular FunctionDNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005515Molecular Functionprotein binding
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    Send to blast
PYKIKKRLTQ SDLGHMSRLL IGRDSVKSHF LRWMNEETVR QVESSKGADV IVRDMDTCSE  60
HRLVFVFWAS SGSYVLKGGW IKEFVKRRGL AVGDEVGIYW EPIASEFHFS LLHKAN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010058716.11e-79PREDICTED: uncharacterized protein LOC104446575
TrEMBLA0A059C5982e-77A0A059C598_EUCGR; Uncharacterized protein (Fragment)
STRINGXP_010058714.15e-79(Eucalyptus grandis)
STRINGXP_010058716.14e-79(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33720.11e-23B3 family protein