PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC053572.30
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 81aa    MW: 8740.79 Da    PI: 4.3467
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC053572.30genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.61.3e-0722453356
           AP2 33 lgkfgtaeeAakaaiaarkklege 56
                  lg+f tae+Aa+a+++a+++++g+
  EcC053572.30 22 LGTFETAEQAARAYDRAALEFRGA 45
                  8********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103212.326152IPR001471AP2/ERF domain
SMARTSM003804.4E-51358IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-101953IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.107.3E-152153IPR001471AP2/ERF domain
CDDcd000181.03E-142252No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007165Biological Processsignal transduction
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005509Molecular Functioncalcium ion binding
GO:0005515Molecular Functionprotein binding
GO:0043531Molecular FunctionADP binding
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    Send to blast
IDGCLGCNFF APGXXXXXXX XLGTFETAEQ AARAYDRAAL EFRGARAKLN FPLLPNDCTS  60
TGAGKSRDMM EDGEAEETIK A
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010026297.17e-34PREDICTED: ethylene-responsive transcription factor ERF109
TrEMBLA0A059AYI41e-32A0A059AYI4_EUCGR; Uncharacterized protein
STRINGXP_010026297.13e-33(Eucalyptus grandis)