PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC053612.70
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 129aa    MW: 14093.8 Da    PI: 8.5066
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC053612.70genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY50.73.7e-161372359
                  EEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
          WRKY 23 sYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                  sYYrCt ++C+vkk+vers+edp++v++tYeg+H h+
  EcC053612.70  1 SYYRCTNSRCTVKKRVERSSEDPTIVITTYEGQHCHH 37
                  8*********************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081116.329139IPR003657WRKY domain
SuperFamilySSF1182901.96E-12137IPR003657WRKY domain
SMARTSM007741.7E-7138IPR003657WRKY domain
PfamPF031068.1E-11137IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.1E-14137IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005975Biological Processcarbohydrate metabolic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009664Biological Processplant-type cell wall organization
GO:0015074Biological ProcessDNA integration
GO:0005576Cellular Componentextracellular region
GO:0016020Cellular Componentmembrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008168Molecular Functionmethyltransferase activity
GO:0019904Molecular Functionprotein domain specific binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    Send to blast
SYYRCTNSRC TVKKRVERSS EDPTIVITTY EGQHCHHSAG FPRGGFVISR DATGLVGGRL  60
APLATHLDHP PFQLPQEISP PPHPPSNYLR STQLPSSSSG DSRALQVHNL ADIDQGLLGD  120
IVPPGMRNR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010066855.16e-90PREDICTED: probable WRKY transcription factor 57 isoform X1
RefseqXP_010066856.16e-90PREDICTED: probable WRKY transcription factor 57 isoform X1
TrEMBLA0A059BFB91e-88A0A059BFB9_EUCGR; Uncharacterized protein
STRINGXP_010066855.12e-89(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.21e-30WRKY DNA-binding protein 57