PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcC053724.10

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

Trihelix

Protein Properties

Length: 308aa MW: 34613 Da PI: 4.2095

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcC053724.10	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27.1	1.1e-08	78	161	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmre.rgferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W++ +L+e+ e+ +l+ ++ + +W+e+++k++e +e + + C++ ++ l+k+ykk+++ +++ +++ ++ +f++++ EcC053724.10 78 WSDYAKFTLLEVWGERFMQLGGKSVRSEDWSEIAEKVSEwARMEYTEIDCRQQLDALKKKYKKERAKMER--TGVTPSWMHFKKMD 161 77777788999999999999999************77256799******************998..588889*****7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	4.4E-15	76	162	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0008152	Biological Process	metabolic process
GO:0016758	Molecular Function	transferase activity, transferring hexosyl groups

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence Send to blast
RGVRSLDGGG GYGDDGDDGG GNYGIRQNPS YGYDYQNGHG GFSGGGSGGQ GYVRKRGQEE 60 LVPAHEYGAG FPDQAPPWSD YAKFTLLEVW GERFMQLGGK SVRSEDWSEI AEKVSEWARM 120 EYTEIDCRQQ LDALKKKYKK ERAKMERTGV TPSWMHFKKM DVLMDTNMED GGLACGVDSG 180 EFCFADTMVY LDKSNAFDEM RDSPGESESE MDGDEEQDDD MPPPRKEDGG EGMRVLVDSI 240 EKFGELYEKI ETNKREQMME LKKMRADFQR ELDLQKKEIL ERAQAEIAKI QAGGMDDGDE 300 DDDDICSE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010050503.1	0.0	PREDICTED: trihelix transcription factor ASIL2
TrEMBL	A0A059CN88	0.0	A0A059CN88_EUCGR; Uncharacterized protein
STRING	XP_010050503.1	0.0	(Eucalyptus grandis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	1e-63	Trihelix family protein