PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC053760.50
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 117aa    MW: 13553.4 Da    PI: 7.3332
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC053760.50genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY53.83.9e-1740821759
                  T-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
          WRKY 17 gsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                  gs   r+YY+C+s+gC vkk+ver+++d ++v +tYeg Hnhe
  EcC053760.50 40 GSYECRNYYKCSSRGCLVKKRVERDRDDSSYVMTTYEGVHNHE 82
                  78889*************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007744.6E-93983IPR003657WRKY domain
SuperFamilySSF1182901.44E-143984IPR003657WRKY domain
PROSITE profilePS5081118.5564084IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.9E-164084IPR003657WRKY domain
PfamPF031061.3E-114082IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005975Biological Processcarbohydrate metabolic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007264Biological Processsmall GTPase mediated signal transduction
GO:0016226Biological Processiron-sulfur cluster assembly
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005198Molecular Functionstructural molecule activity
GO:0005515Molecular Functionprotein binding
GO:0005524Molecular FunctionATP binding
GO:0005525Molecular FunctionGTP binding
GO:0016887Molecular FunctionATPase activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0051536Molecular Functioniron-sulfur cluster binding
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    Send to blast
MAMEEHYFLG FVRCQRCLWT LFNICPKCNL VLVLEQYPTG SYECRNYYKC SSRGCLVKKR  60
VERDRDDSSY VMTTYEGVHN HESPSLVYYN YKQMGPVVDA VASGGWDPQA PPSHYSS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010027762.18e-48PREDICTED: probable WRKY transcription factor 51 isoform X1
RefseqXP_018717773.18e-48PREDICTED: probable WRKY transcription factor 51 isoform X2
TrEMBLA0A059AKZ12e-46A0A059AKZ1_EUCGR; Uncharacterized protein
TrEMBLA0A059ALT42e-46A0A059ALT4_EUCGR; Uncharacterized protein
STRINGXP_010027762.13e-47(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.18e-22WRKY DNA-binding protein 51