PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC053818.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 147aa    MW: 16944.3 Da    PI: 9.0765
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC053818.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM713.2e-2261313127
           NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                   pGf F+P+d+el ++yL +++++++l+  + i+++d+y   ePw++    k +  + y F+  +kk  + +r  r++ sg Wk   +  + ++ +g 
  EcC053818.10   6 PGFCFQPSDQELFSDYLMRRLNEEPLPDPNLIRDCDVYGGgEPWKIF-D-KDRGGKFYVFTVPKKK--NRSRVDRTAGSGSWKGEQS-SDFKDLQGD 97 
                   9************************999999*******866*****6.2.2334466777776665..678************7765.555555899 PP

           NAM  99 lvglkktLvfy.....kgrapkgektdWvmheyr 127
                   ++g kk ++f      +++a k+e+ +W+m ey 
  EcC053818.10  98 VIGYKKLFTFKlkagwSAKADKAENGHWIMYEYL 131
                   **********9888777899999**********5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.1354147IPR003441NAC domain
SuperFamilySSF1019412.09E-215132IPR003441NAC domain
PfamPF023651.4E-156130IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MATRHPGFCF QPSDQELFSD YLMRRLNEEP LPDPNLIRDC DVYGGGEPWK IFDKDRGGKF  60
YVFTVPKKKN RSRVDRTAGS GSWKGEQSSD FKDLQGDVIG YKKLFTFKLK AGWSAKADKA  120
ENGHWIMYEY LKHPYNVSVS FPFLLGC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-12613017138Stress-induced transcription factor NAC1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018729435.19e-90PREDICTED: NAC domain-containing protein 68-like isoform X1
STRINGXP_010055621.15e-89(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.12e-14NAC domain containing protein 32