PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054113.80
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family HB-other
Protein Properties Length: 522aa    MW: 58729.7 Da    PI: 8.6019
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054113.80genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox598e-191974257
                  T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
      Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                   +R+  t+ ql +Le+++++++yp++e++ +LA+++gLte+q++ WF+ rR k+k+
  EcC054113.80 19 NRRRFKTPAQLAALESFYNEQKYPTEEMKSQLAEQIGLTEKQISGWFCHRRLKDKR 74
                  6778889***********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.5E-20574IPR009057Homeodomain-like
PROSITE profilePS5007117.0541575IPR001356Homeobox domain
SMARTSM003893.7E-181779IPR001356Homeobox domain
SuperFamilySSF466899.84E-181783IPR009057Homeodomain-like
CDDcd000861.71E-161874No hitNo description
PfamPF000461.9E-161974IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006433Biological Processprolyl-tRNA aminoacylation
GO:0006468Biological Processprotein phosphorylation
GO:0055114Biological Processoxidation-reduction process
GO:0005737Cellular Componentcytoplasm
GO:0016020Cellular Componentmembrane
GO:0003677Molecular FunctionDNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0004827Molecular Functionproline-tRNA ligase activity
GO:0005506Molecular Functioniron ion binding
GO:0005515Molecular Functionprotein binding
GO:0005524Molecular FunctionATP binding
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016788Molecular Functionhydrolase activity, acting on ester bonds
GO:0016887Molecular FunctionATPase activity
GO:0020037Molecular Functionheme binding
Sequence ? help Back to Top
Protein Sequence    Length: 522 aa     Download sequence    Send to blast
FTESSEAHSA EEKASSEKNR RRFKTPAQLA ALESFYNEQK YPTEEMKSQL AEQIGLTEKQ  60
ISGWFCHRRL KDKRLLREEV YADGRQDRSS GVVQDRGSGL RQDSCGSTKQ GDRRLFDPRE  120
VESRRLYGQN SPSADLTFEP KSHYAGNLAP LDDTSSGSSS ALQDGFGSQG TDKYDNCRPL  180
AKHEGISSFH RKSTNDMRYR PSGYLKVKGE IENAAITAVK RQLGRQYRED GPLLGIEFDP  240
LPPGAFESPL GESTYGPRYV EDPSLPQSPE IYGIQKQPSL NTQHEEYNSK LSPQKAYEEG  300
EDFSTVDRLD YSDYRPHNQF KQRYTPSSQI GDLGGWKSSV HMQDYPTGDA YAYNNGRRSG  360
LTSKHAAEGM RSDFAFDHLH TTSAKITSRK RESRLNDYDA IHAEFVQNSE IVRPRPSNLV  420
LQHSESFNAG EGGPSKRILK EEKRYRERGT AAGYIEPLRE KMRPPKEMAS AKRVRTKFPQ  480
QDFVTKASAV MPPWKNQTKG SAAQMPSSLS NDEAADTSSS LG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010031727.10.0PREDICTED: uncharacterized protein LOC104421472 isoform X1
TrEMBLA0A059AB880.0A0A059AB88_EUCGR; Uncharacterized protein
STRINGXP_010031727.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03250.14e-69HB-other family protein