PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054121.160
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 283aa    MW: 28502.2 Da    PI: 5.0549
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054121.160genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.65.6e-13238281447
                    XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                     +++rr++kNRe+A rsR+RK+a+++eLe  v +Le+e  +L  
  EcC054121.160 238 QQKQRRMIKNRESAARSRERKQAYTAELESLVTQLEEEKARLLR 281
                    689************************************99865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0015235282IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.622237283IPR004827Basic-leucine zipper domain
PfamPF001705.6E-11237281IPR004827Basic-leucine zipper domain
CDDcd147073.94E-18239281No hitNo description
SuperFamilySSF579593.5E-9240282No hitNo description
Gene3DG3DSA:1.20.5.1702.9E-12240282No hitNo description
PROSITE patternPS000360242257IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006629Biological Processlipid metabolic process
GO:0006760Biological Processfolic acid-containing compound metabolic process
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004150Molecular Functiondihydroneopterin aldolase activity
GO:0005515Molecular Functionprotein binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MASSKVMTST TPSRGNQDLP LQSSISSSLS ALISDLRDHH HSSSSHAAAA STNASAADSS  60
GTVTMDDLLK NIYSDDGPAT PDHSLFGHGG VGVVGDGAGM PGGGGGGGGD GGGIKTVDEV  120
WKEIVAGSDG ASGRGEEEMT LEDFLTKNGA VREEDVRIGG GGGGGAGGYC GEAAGDLNGH  180
LIQVGGPVGV GVGVGVGVGV GVGVGGGVSN NNGGIEGRLV VGRGKRRAVE EPVDKATQQK  240
QRRMIKNRES AARSRERKQA YTAELESLVT QLEEEKARLL REE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010065506.11e-103PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 6
TrEMBLA0A059BAH91e-101A0A059BAH9_EUCGR; Uncharacterized protein
STRINGXP_010065506.11e-102(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.13e-15bZIP family protein