PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054136.50
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 299aa    MW: 32542.7 Da    PI: 6.1455
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054136.50genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.3e-194796356
           AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                  + GVr+++ +gr++AeIrdp++   + r++lg+f+taeeAa a+++a+++++g+
  EcC054136.50 47 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAEEAALAYDRAARSMRGA 96
                  67******.**********965...5*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.89E-2945102No hitNo description
PROSITE profilePS5103220.69246103IPR001471AP2/ERF domain
SMARTSM003803.8E-3346109IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-2147104IPR016177DNA-binding domain
PRINTSPR003673.9E-84758IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.8E-2947103IPR001471AP2/ERF domain
PfamPF008477.4E-124995IPR001471AP2/ERF domain
PRINTSPR003673.9E-86985IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0055114Biological Processoxidation-reduction process
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005506Molecular Functioniron ion binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037Molecular Functionheme binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MDHLNFTVSS SPVNSPSPSK AKRKHQQQQT PPPLQTHQDD GAAPARFLGV RRRPWGRYAA  60
EIRDPTTKER HWLGTFDTAE EAALAYDRAA RSMRGAKART NFVYSDMPPG SSVTSLVSPD  120
EAHSDFAALF ISQHHHQQQE LPHHHHHSKN SNNPNHQLFY TPGSMSACNV DFTSGLPAEN  180
GWAADGYLGG GPYHPATGIA DFGDAARPQS YDEAELPPFP PDLSSCYGSG LDMGHGGWTD  240
MGFLGLQDQS IVPGPSNGLN MGFDPNELVE HSPLFGRMPQ VSDKGVDGFD LGSSSAYYF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-1941102971Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010044897.10.0PREDICTED: ethylene-responsive transcription factor LEP
TrEMBLA0A059D9620.0A0A059D962_EUCGR; Uncharacterized protein
STRINGXP_010044897.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.16e-34ERF family protein