PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054205.80
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 229aa    MW: 25420.1 Da    PI: 6.5118
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054205.80genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.81.5e-30120179258
                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                   dDg++WrKYGqKe+ gs+fpr+YYrCt++   gCp++k+v+rs++dp+v+eitY+g+H++
  EcC054205.80 120 DDGFSWRKYGQKEILGSKFPRGYYRCTHKhvqGCPATKQVQRSDDDPTVFEITYRGRHTC 179
                   8***************************99999*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.2E-30106179IPR003657WRKY domain
SuperFamilySSF1182901.28E-26114179IPR003657WRKY domain
SMARTSM007749.0E-42119181IPR003657WRKY domain
PROSITE profilePS5081122.687120177IPR003657WRKY domain
PfamPF031069.1E-29120179IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0043531Molecular FunctionADP binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MEDWEKMNLP NELIQGRELT KQLQRQLHSA VSSSSSSSHE QTQEMLIRGI LTSYDEALSM  60
LNAEPPVGGC PRRLSVSPPS LGGSPMSRGD SDRNLDDGST PRKREAMQRW TERVRAPTPD  120
DGFSWRKYGQ KEILGSKFPR GYYRCTHKHV QGCPATKQVQ RSDDDPTVFE ITYRGRHTCF  180
DHPATVVPSS TLPENQTDSN ASIDDAPLQI GELPVYVSAA TSGNNSQAT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-21114183977Disease resistance protein RRS1
5w3x_D1e-21114183977Disease resistance protein RRS1
6ir8_A8e-22120179968OsWRKY45
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018732490.11e-152PREDICTED: probable WRKY transcription factor 8
TrEMBLA0A059B9V81e-149A0A059B9V8_EUCGR; Uncharacterized protein
STRINGXP_010068012.11e-143(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.15e-41WRKY family protein