PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054267.30
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 263aa    MW: 28482.5 Da    PI: 5.9276
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054267.30genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.73.3e-1982130355
           AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                   y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta eAaka+++a+ +++g
  EcC054267.30  82 YRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTAIEAAKAYDEAATAMYG 130
                   9****999.**********8...3.35**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003806.8E-3781144IPR001471AP2/ERF domain
CDDcd000188.96E-3181138No hitNo description
PROSITE profilePS5103222.27381138IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.2E-3281139IPR001471AP2/ERF domain
PRINTSPR003675.2E-108293IPR001471AP2/ERF domain
SuperFamilySSF541712.55E-2182139IPR016177DNA-binding domain
PfamPF008477.9E-1482130IPR001471AP2/ERF domain
PRINTSPR003675.2E-10104120IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006812Biological Processcation transport
GO:0055085Biological Processtransmembrane transport
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0015299Molecular Functionsolute:proton antiporter activity
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MVVSASSTDV FSFALSSPRK RSRRRKEGSM SVAETLAKWK QYNDQLDPQV NGDKPARRVP  60
AKGSKKGCMK GKGGPENTTF NYRGVRQRTW GKWVAEIREP NRGSRLWLGT FPTAIEAAKA  120
YDEAATAMYG PCARLNFPTP SHPMSFGDLD ARATTPVGTT ANTTGTPSTG YSAGTPSTGY  180
SAGTPSEATT LSSQSELTGG PEVKDGDRKG ESNADGGEME PKSESIVDFD WLSDYAVDDL  240
FDVDELLRTL ESDPKFSDVK MEH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-16821381572Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010067565.11e-165PREDICTED: dehydration-responsive element-binding protein 2B
TrEMBLA0A059BJ531e-164A0A059BJ53_EUCGR; Uncharacterized protein
STRINGXP_010067565.11e-165(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.13e-31DRE-binding protein 2A