PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054537.40
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 195aa    MW: 22648.7 Da    PI: 10.6337
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054537.40genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.77.9e-1183134556
                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                   ++ rr+ +NRe+ArrsR RK+  +e+L++ v  L+ +N++L ++l     ++
  EcC054537.40  83 RKRRRMVSNRESARRSRMRKQRHLENLRNQVNRLKVQNRELSNRLRLVLYHC 134
                   5779999***********************************9987766555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.3E-878128No hitNo description
SMARTSM003385.8E-1179143IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.59981127IPR004827Basic-leucine zipper domain
PfamPF001703.0E-883137IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.9E-1083133No hitNo description
CDDcd147022.05E-1884134No hitNo description
PROSITE patternPS00036086101IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MLAARPTGFP FGPVPYSPFQ SFDNDFAPWD CIDNPFSDKI QSPKPVTSTS MSDDSNLDPV  60
SYPSNSGKSS GEKRKGDAAV DERKRRRMVS NRESARRSRM RKQRHLENLR NQVNRLKVQN  120
RELSNRLRLV LYHCYLLRRS NDQLRSEQSM LRHKLSNMQQ ILLLQQLQQQ QNIPSWPCNS  180
TPIIETCERT SSLIL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17286KRKGDAAVDERKRRR
28286RKRRR
395102RRSRMRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010028071.21e-139PREDICTED: light-inducible protein CPRF2-like
TrEMBLA0A3N7G0T94e-60A0A3N7G0T9_POPTR; Uncharacterized protein
STRINGXP_010028071.11e-138(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.14e-28basic leucine-zipper 5