PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054610.60
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 57aa    MW: 6625.62 Da    PI: 4.4186
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054610.60genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM46.11.6e-14455148
           NAM  1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLp 48
                  lppGfrF Pt+eelv++yL+ k+eg++      +++vi+ +diy+++P+dLp
  EcC054610.60  4 LPPGFRFFPTEEELVSFYLRSKLEGTRgalhGLIDRVIPVLDIYEFNPSDLP 55
                  79************************977642234579999**********9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.93E-16357IPR003441NAC domain
PROSITE profilePS5100519.074457IPR003441NAC domain
PfamPF023653.0E-7551IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006412Biological Processtranslation
GO:0055114Biological Processoxidation-reduction process
GO:0005840Cellular Componentribosome
GO:0003677Molecular FunctionDNA binding
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0016491Molecular Functionoxidoreductase activity
GO:0035091Molecular Functionphosphatidylinositol binding
Sequence ? help Back to Top
Protein Sequence    Length: 57 aa     Download sequence    Send to blast
MEDLPPGFRF FPTEEELVSF YLRSKLEGTR GALHGLIDRV IPVLDIYEFN PSDLPRM
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010024757.11e-31PREDICTED: NAC domain-containing protein 90
TrEMBLA0A059DJF03e-30A0A059DJF0_EUCGR; Uncharacterized protein
STRINGXP_010024757.15e-31(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.14e-15NAC domain containing protein 90