PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054688.70
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 370aa    MW: 40452.7 Da    PI: 5.789
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054688.70genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.91.2e-29132193159
                   ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
          WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                   ldDg++WrKYGqK++ g+++pr+YYrCt++   gC ++k+v+rs++dp+++e+tY+g+H+++
  EcC054688.70 132 LDDGFSWRKYGQKDILGAKYPRGYYRCTHRnvqGCLATKQVQRSDDDPTIFEVTYRGRHTCN 193
                   59***************************98999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081123.238127190IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.8E-29129194IPR003657WRKY domain
SuperFamilySSF1182902.48E-26131194IPR003657WRKY domain
SMARTSM007742.2E-42132194IPR003657WRKY domain
PfamPF031062.1E-27133192IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005992Biological Processtrehalose biosynthetic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006412Biological Processtranslation
GO:0006468Biological Processprotein phosphorylation
GO:0009396Biological Processfolic acid-containing compound biosynthetic process
GO:0055085Biological Processtransmembrane transport
GO:0005840Cellular Componentribosome
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0004326Molecular Functiontetrahydrofolylpolyglutamate synthase activity
GO:0004672Molecular Functionprotein kinase activity
GO:0005515Molecular Functionprotein binding
GO:0005524Molecular FunctionATP binding
GO:0019843Molecular FunctionrRNA binding
GO:0022857Molecular Functiontransmembrane transporter activity
GO:0030247Molecular Functionpolysaccharide binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MENMGDWEKM TLMNELKQGR ELTKQLQQQL HSAVSLLSSS SSSSHDQTQE MLIHRIMASY  60
DKALSMLNVE PQAGGCPRRA SESPPSLGGS PMSGGDSDRD LNDGSTPRKR KVMQRWTKRV  120
RVAPGTGLEG PLDDGFSWRK YGQKDILGAK YPRGYYRCTH RNVQGCLATK QVQRSDDDPT  180
IFEVTYRGRH TCNQHPAAVI SPSLPPETQT DFNASVNATP LQSVQSQHQQ NQTGPQDIAF  240
DFREGLAIAT QNLDSNNGNH NPSSSMFIFP STPEHIFGVM NSNSNFSSNP DFLSVSTSGT  300
DCFSVPPARL DSFQAGPSFG APESELAMIV SAAASGNNPQ ANARSDSDLP LHGMEFANEN  360
IAFDSTEFFP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-21132192868OsWRKY45
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010035220.10.0PREDICTED: probable WRKY transcription factor 41
TrEMBLA0A058ZXI60.0A0A058ZXI6_EUCGR; Uncharacterized protein
STRINGXP_010035220.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.13e-47WRKY family protein