PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054698.110
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 248aa    MW: 27171.1 Da    PI: 9.3207
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054698.110genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.11.2e-1459105353
            AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                    + GVr+++ +grWvAeI+d +    + r +lg+f +aeeAa a++ a+  l
  EcC054698.110  59 FLGVRQRP-SGRWVAEIKDST---LKLRLWLGTFNSAEEAALAYDSAAWLL 105
                    67******.7*********32...35*******************998555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003804.7E-3258121IPR001471AP2/ERF domain
CDDcd000181.63E-2958115No hitNo description
PROSITE profilePS5103220.04758115IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-2658115IPR001471AP2/ERF domain
PRINTSPR003676.3E-75970IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-1959116IPR016177DNA-binding domain
PfamPF008471.5E-961102IPR001471AP2/ERF domain
PRINTSPR003676.3E-78197IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006096Biological Processglycolytic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0007018Biological Processmicrotubule-based movement
GO:0009446Biological Processputrescine biosynthetic process
GO:0015914Biological Processphospholipid transport
GO:0055114Biological Processoxidation-reduction process
GO:0000015Cellular Componentphosphopyruvate hydratase complex
GO:0005730Cellular Componentnucleolus
GO:0016021Cellular Componentintegral component of membrane
GO:0000287Molecular Functionmagnesium ion binding
GO:0003697Molecular Functionsingle-stranded DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003723Molecular FunctionRNA binding
GO:0003777Molecular Functionmicrotubule motor activity
GO:0004012Molecular Functionphospholipid-translocating ATPase activity
GO:0004634Molecular Functionphosphopyruvate hydratase activity
GO:0004668Molecular Functionprotein-arginine deiminase activity
GO:0004672Molecular Functionprotein kinase activity
GO:0005509Molecular Functioncalcium ion binding
GO:0005524Molecular FunctionATP binding
GO:0008017Molecular Functionmicrotubule binding
GO:0016702Molecular Functionoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0016844Molecular Functionstrictosidine synthase activity
GO:0046982Molecular Functionprotein heterodimerization activity
GO:0047632Molecular Functionagmatine deiminase activity
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MDQPSSCVTF PETPSKSSSG GTSTSVERAR DSGQGGENTI AMRKNIKRRA KGDDAMRRFL  60
GVRQRPSGRW VAEIKDSTLK LRLWLGTFNS AEEAALAYDS AAWLLRGRNA KTNFPCHQLI  120
GNHPEVNCSF VGQHPKVDQI LQHANMKQQQ ARSSSSSVLN SFLNHPWRDR NGSSEGGSKD  180
VNTLVQETIV CSPASPKEGS GRCGIQENES RGLSLFGSSK VYSSVFVAPS FSSSTHQDER  240
GQYDFQEA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-14581221479Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010031405.11e-168PREDICTED: ethylene-responsive transcription factor CRF4
TrEMBLA0A059CZ691e-144A0A059CZ69_EUCGR; Uncharacterized protein
STRINGXP_010031405.11e-168(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-16related to AP2 11