PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054700.100
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family C2H2
Protein Properties Length: 451aa    MW: 51366.7 Da    PI: 8.2732
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054700.100genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.40.0001188108323
                    ETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                    C  Cg+ F ++  L  H+++H
  EcC054700.100  88 CRECGRGFQSWKALFGHMKRH 108
                    ********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.42931IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.118936IPR007087Zinc finger, C2H2
SuperFamilySSF576673.97E-9931No hitNo description
Gene3DG3DSA:3.30.160.601.2E-4931IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139126.4E-5932IPR007087Zinc finger, C2H2
PROSITE patternPS0002801131IPR007087Zinc finger, C2H2
SuperFamilySSF576673.97E-981108No hitNo description
PROSITE profilePS5015710.36786113IPR007087Zinc finger, C2H2
SMARTSM003550.03386108IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028088108IPR007087Zinc finger, C2H2
PfamPF139121.2E-588110IPR007087Zinc finger, C2H2
SuperFamilySSF576672.17E-5325355No hitNo description
PfamPF139124.1E-11327352IPR007087Zinc finger, C2H2
SMARTSM003550.064328350IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015711.157328355IPR007087Zinc finger, C2H2
PROSITE patternPS000280330350IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006412Biological Processtranslation
GO:0006633Biological Processfatty acid biosynthetic process
GO:0007205Biological Processprotein kinase C-activating G-protein coupled receptor signaling pathway
GO:0035556Biological Processintracellular signal transduction
GO:0055114Biological Processoxidation-reduction process
GO:0005840Cellular Componentribosome
GO:0009317Cellular Componentacetyl-CoA carboxylase complex
GO:0003677Molecular FunctionDNA binding
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0003989Molecular Functionacetyl-CoA carboxylase activity
GO:0004143Molecular Functiondiacylglycerol kinase activity
GO:0005506Molecular Functioniron ion binding
GO:0005524Molecular FunctionATP binding
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016758Molecular Functiontransferase activity, transferring hexosyl groups
GO:0020037Molecular Functionheme binding
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    Send to blast
MEEDREFQHV CKICSKSFHC SRSLGGHMRS HLIDNEPVET DENLNLDTSK LLSMTTGYGL  60
RENPKKTWKG SDFSEETSVS VSVRERFCRE CGRGFQSWKA LFGHMKRHSE KEKVSRSLGG  120
GDSYDQKQLS RDGQSKSKEA TILYRRRRSE RRKRHMERAG AANSSSLSFA TASSSASEID  180
QQEQEEVAMC LVMLSRDVKN SSSLWGCEKE EQMKMKDLEE KSNLEMGTSG IDDSQFDNRI  240
ADICFLANSR HWHKMNLLAD SKQFKKEVQS QSEAVTDHAR LQLGKIDSSK RKLTSSYDPE  300
LKVNLPQKWD ADNLDSQILH SPVKRSRFQC TTCNKAFHSY QALGGHRASH KKAMPTVASE  360
IKSNDNGIEM AISPDPTVDV KPLKLRKPES TSNLDKEVVL RNDLKIKKIR EFLDLNLPAP  420
LDEEERGHVG FTSWWLERNY NPEALIGLVS N
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010030507.10.0PREDICTED: zinc finger protein ZAT9
TrEMBLA0A059D0E50.0A0A059D0E5_EUCGR; Uncharacterized protein
STRINGXP_010030507.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.12e-20C2H2-like zinc finger protein