PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054785.90
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 190aa    MW: 20156.2 Da    PI: 4.7798
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054785.90genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY48.51.7e-155432259
                  EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
          WRKY 22 rsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                  r+YYrC+s+ gCp++k+vers+ dp+++ itY+++Hnh 
  EcC054785.90  5 RGYYRCSSSkGCPARKQVERSRLDPTTLLITYSSDHNHA 43
                  99*****998****************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007744.4E-8344IPR003657WRKY domain
SuperFamilySSF1182903.4E-12445IPR003657WRKY domain
PfamPF031062.0E-12442IPR003657WRKY domain
PROSITE profilePS5081119.129545IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.3E-15545IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007264Biological Processsmall GTPase mediated signal transduction
GO:0015074Biological ProcessDNA integration
GO:0055114Biological Processoxidation-reduction process
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005506Molecular Functioniron ion binding
GO:0005525Molecular FunctionGTP binding
GO:0009055Molecular Functionelectron carrier activity
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037Molecular Functionheme binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MGLDRGYYRC SSSKGCPARK QVERSRLDPT TLLITYSSDH NHAVPSSSSS KNHHHLRAAA  60
VSDSSASASA SASASASAAD PDDCISAMFE PDELAGFIGG ATLLDPGFDW LADVASTSSF  120
LQRPVYEGGG AEAAPVHRMR DEEEGEDPLF ADLGELPECS LVFRRTKLLE PEGESRRRGL  180
SAVPCVGNVV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010035877.21e-111PREDICTED: probable WRKY transcription factor 69 isoform X1
RefseqXP_018720196.11e-111PREDICTED: probable WRKY transcription factor 69 isoform X2
TrEMBLA0A059A2141e-110A0A059A214_EUCGR; Uncharacterized protein
STRINGXP_010035877.11e-114(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.12e-27WRKY DNA-binding protein 65