PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054805.150
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 210aa    MW: 23941.4 Da    PI: 7.5837
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054805.150genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.41.6e-10958152
                   CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHH CS
            HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIk 52
                   +++ hn+ Er RR ++N ++  L  +lP++   +skK     +i  ++ eYI 
  EcC054805.150  9 KKEDHNAKERVRRMNLNACYMALANMLPPP---SSKKrQGAPAIIDEVLEYIP 58
                   6889*************************8...66665999999999999995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.55E-7665No hitNo description
SuperFamilySSF474591.18E-12678IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-10680IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.992860IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.9E-7958IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.3E-51466IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0006486Biological Processprotein glycosylation
GO:0006544Biological Processglycine metabolic process
GO:0006563Biological ProcessL-serine metabolic process
GO:0006979Biological Processresponse to oxidative stress
GO:0009626Biological Processplant-type hypersensitive response
GO:0009751Biological Processresponse to salicylic acid
GO:0010204Biological Processdefense response signaling pathway, resistance gene-independent
GO:0015074Biological ProcessDNA integration
GO:0022900Biological Processelectron transport chain
GO:0030001Biological Processmetal ion transport
GO:0042254Biological Processribosome biogenesis
GO:0046283Biological Processanthocyanin-containing compound metabolic process
GO:0046488Biological Processphosphatidylinositol metabolic process
GO:0055085Biological Processtransmembrane transport
GO:0005777Cellular Componentperoxisome
GO:0005783Cellular Componentendoplasmic reticulum
GO:0016021Cellular Componentintegral component of membrane
GO:0003676Molecular Functionnucleic acid binding
GO:0003980Molecular FunctionUDP-glucose:glycoprotein glucosyltransferase activity
GO:0004252Molecular Functionserine-type endopeptidase activity
GO:0004372Molecular Functionglycine hydroxymethyltransferase activity
GO:0004601Molecular Functionperoxidase activity
GO:0004616Molecular Functionphosphogluconate dehydrogenase (decarboxylating) activity
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
GO:0008270Molecular Functionzinc ion binding
GO:0009055Molecular Functionelectron carrier activity
GO:0016308Molecular Function1-phosphatidylinositol-4-phosphate 5-kinase activity
GO:0016627Molecular Functionoxidoreductase activity, acting on the CH-CH group of donors
GO:0020037Molecular Functionheme binding
GO:0030170Molecular Functionpyridoxal phosphate binding
GO:0046873Molecular Functionmetal ion transmembrane transporter activity
GO:0046983Molecular Functionprotein dimerization activity
GO:0051287Molecular FunctionNAD binding
GO:0051537Molecular Function2 iron, 2 sulfur cluster binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
EMEMTREKKK EDHNAKERVR RMNLNACYMA LANMLPPPSS KKRQGAPAII DEVLEYIPEI  60
KKEIEELTLQ KESMLSAIDP NKQSVLNNSS HTSSESNEGR LTLSVHEIAK GELVLQICTK  120
RDQRNHELSN LLWNLEAEGI SILNASTVEV PHDRVCFHIH VQVYANRIIS CLFFSLWRSV  180
RVLGLNSFTT TFIVSFSSLK LNSVAKENYS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018717827.11e-113PREDICTED: uncharacterized protein LOC104419969 isoform X2
TrEMBLA0A218X4S17e-42A0A218X4S1_PUNGR; Uncharacterized protein
TrEMBLA0A2P5F3G36e-43A0A2P5F3G3_TREOI; Achaete-scute transcription factor-related
STRINGXP_010030117.11e-111(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71200.12e-14bHLH family protein