PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054811.200
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 212aa    MW: 22232.6 Da    PI: 4.0768
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054811.200genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.51.8e-142441055
            AP2 10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   +++g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  EcC054811.200  2 RTWGKWVSEIREPRK---KNRIWLGTFSTAEMAARAHDVAALAIKG 44
                   46**********854...59**********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003805.7E-28158IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.6E-27153IPR001471AP2/ERF domain
PROSITE profilePS5103219.888152IPR001471AP2/ERF domain
CDDcd000181.89E-26154No hitNo description
PfamPF008479.7E-9244IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-18253IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006108Biological Processmalate metabolic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006396Biological ProcessRNA processing
GO:0006486Biological Processprotein glycosylation
GO:0015074Biological ProcessDNA integration
GO:0055085Biological Processtransmembrane transport
GO:0055114Biological Processoxidation-reduction process
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003723Molecular FunctionRNA binding
GO:0004471Molecular Functionmalate dehydrogenase (decarboxylating) (NAD+) activity
GO:0004576Molecular Functionoligosaccharyl transferase activity
GO:0004616Molecular Functionphosphogluconate dehydrogenase (decarboxylating) activity
GO:0005506Molecular Functioniron ion binding
GO:0005515Molecular Functionprotein binding
GO:0005524Molecular FunctionATP binding
GO:0008173Molecular FunctionRNA methyltransferase activity
GO:0008270Molecular Functionzinc ion binding
GO:0042626Molecular FunctionATPase activity, coupled to transmembrane movement of substances
GO:0051287Molecular FunctionNAD binding
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
MRTWGKWVSE IREPRKKNRI WLGTFSTAEM AARAHDVAAL AIKGNSAILN FPDLAPSLPR  60
PASSAPRDVQ AAAAKAASMT GVSESPATAA DAAAAATTPS PSDALSPPSS VPTTSSSSSS  120
YLSSSSCADD VSAPEELGEI VELPRLGTNF GFEPMMSDSA VMNDFIYADL ADAWAYPPEP  180
YGQDYDYFNG DQTTATEGGI IGGGLEALLW QY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-142522172Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010047704.11e-150PREDICTED: ethylene-responsive transcription factor TINY-like
TrEMBLA0A2N9GB801e-56A0A2N9GB80_FAGSY; Uncharacterized protein
STRINGXP_010047704.11e-150(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32800.11e-28ERF family protein