PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054812.230
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 65aa    MW: 7467.87 Da    PI: 11.7045
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054812.230genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.91.5e-071541531
                   HHHHHHHHHHHHHHHHHHHHCTSCCC. CS
            HLH  5 hnerErrRRdriNsafeeLrellPkas 31
                    +  E++RR r+N   ++L +l+P+  
  EcC054812.230 15 RKTLEKNRRIRMNILCSKLASLIPQHH 41
                   5789********************962 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508888.6641060IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.04E-61354IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.3E-61442IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-41540IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0006508Biological Processproteolysis
GO:0015937Biological Processcoenzyme A biosynthetic process
GO:0003677Molecular FunctionDNA binding
GO:0003968Molecular FunctionRNA-directed RNA polymerase activity
GO:0004594Molecular Functionpantothenate kinase activity
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
GO:0008233Molecular Functionpeptidase activity
GO:0008270Molecular Functionzinc ion binding
GO:0016788Molecular Functionhydrolase activity, acting on ester bonds
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 65 aa     Download sequence    Send to blast
MNKSTRTNQS LKVERKTLEK NRRIRMNILC SKLASLIPQH HITTSKVLSL SLSLSLSLSL  60
SLWVY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010039149.16e-23PREDICTED: uncharacterized protein LOC104427821
TrEMBLA0A059A6I71e-21A0A059A6I7_EUCGR; Uncharacterized protein
STRINGXP_010039149.12e-22(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-07bHLH family protein