PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054812.70
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family Dof
Protein Properties Length: 337aa    MW: 36458.4 Da    PI: 7.0362
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054812.70genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.21e-3952112262
        zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                   +++ lkcprC+st+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+s
  EcC054812.70  52 HDQPLKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKAS 112
                   7899******************************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-2846106IPR003851Zinc finger, Dof-type
PfamPF027012.1E-3353110IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.05956110IPR003851Zinc finger, Dof-type
PROSITE patternPS0136105894IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0006508Biological Processproteolysis
GO:0015937Biological Processcoenzyme A biosynthetic process
GO:0003677Molecular FunctionDNA binding
GO:0003968Molecular FunctionRNA-directed RNA polymerase activity
GO:0004594Molecular Functionpantothenate kinase activity
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
GO:0008233Molecular Functionpeptidase activity
GO:0008270Molecular Functionzinc ion binding
GO:0016788Molecular Functionhydrolase activity, acting on ester bonds
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MAFTSLQVCM DSSDWLQGTL HDDSGMDTSS PNSGDMLACS RPLMERRLRP QHDQPLKCPR  60
CESTHTKFCY YNNYSLSQPR YFCKTCRRYW TKGGTLRNIP VGGGCRKNKK ASNSGSNSNN  120
SASSKKLANS DHQGYGVPSH PGQSSASSSR GDHSTDLHLS FSPEVQLSHL HGLLGVHGAP  180
FAGPGNNFSG LENPRPIDFL EGKVMSYDSN FMLSGDSPHP HMGVVGDLGG STGLAPGFHG  240
FCGPYGMAID GGHSGNANSF MENCQRLNML VPYDQGHDQE QINAMDVKPN PKLLSLEWQD  300
QGCSDASKNG YGYFNGLGPS WTGMMNDYNA SASNPLV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010037561.10.0PREDICTED: dof zinc finger protein DOF5.6
TrEMBLA0A059A6H40.0A0A059A6H4_EUCGR; Uncharacterized protein
STRINGXP_010037561.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62940.15e-46Dof family protein