PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054877.60
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 747aa    MW: 79074.1 Da    PI: 5.2057
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054877.60genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY106.21.7e-33266323260
                   --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                   +DgynWrKYGqK+vkgsefprsYY+Ct+++C+vkkkvers  d++++ei+Y+g+Hnh+k
  EcC054877.60 266 EDGYNWRKYGQKQVKGSEFPRSYYKCTQPNCQVKKKVERSL-DGQITEIIYKGTHNHPK 323
                   7****************************************.***************85 PP
2WRKY1031.7e-32484542159
                   ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
          WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                   ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver++++ k+v++tYeg+Hnhe
  EcC054877.60 484 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASDNLKYVITTYEGKHNHE 542
                   59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.6E-29258324IPR003657WRKY domain
PROSITE profilePS5081123.652260324IPR003657WRKY domain
SuperFamilySSF1182905.23E-26261324IPR003657WRKY domain
SMARTSM007748.0E-37265323IPR003657WRKY domain
PfamPF031061.0E-25266322IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.2E-35469544IPR003657WRKY domain
SuperFamilySSF1182903.79E-28478544IPR003657WRKY domain
PROSITE profilePS5081137.252479544IPR003657WRKY domain
SMARTSM007742.7E-37484543IPR003657WRKY domain
PfamPF031063.5E-25485542IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006397Biological ProcessmRNA processing
GO:0016311Biological Processdephosphorylation
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004540Molecular Functionribonuclease activity
GO:0004725Molecular Functionprotein tyrosine phosphatase activity
GO:0005515Molecular Functionprotein binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 747 aa     Download sequence    Send to blast
MDANEPSSPE RGGAAAAGGS SSEGEKIGGG GGGGSGGGGG EGGGSGSGGS IAERRAAKCG  60
FNAAASARID TAATAAAGAG AGAGEVAAAG ASDLASPRLT IPPGISPTAL LDSPVMLPNS  120
QLSPTTGTFS LVTFPADSSM VHSESTNDGD KGFSSGRTFS FKPDGCSSPL SGFSALQDQG  180
IGIDKRGFLL EDPKMDIEFQ TEIYQEAAEK NGAFNSSSDA EVLSEMNSDG AQEKESVPEE  240
DTRIDNAEEG DQKGMYPSVG TVRTSEDGYN WRKYGQKQVK GSEFPRSYYK CTQPNCQVKK  300
KVERSLDGQI TEIIYKGTHN HPKPQPIRCG LLRSSFSLNE MSEMADGSGA ANKVEGGSVW  360
RNNQLGSKDV RLGPDWRPDG PEQTSSTSVL TELSGLLPTS QGKCAVAFES AQTPELSSTL  420
ASTDGDDEDG ATQGSMSHGE DADDEEPESK RRKSENSLSE SSLGSRAVRE PRVVIQIESD  480
IDILDDGYRW RKYGQKVVKG NPNPRSYYKC TSAGCSVRKH VERASDNLKY VITTYEGKHN  540
HEVPAARNSN LPSGSGNLSP AAVGAQANMA IPRNSRTNKP EAQVQDLPLF DRKPELHNEF  600
LRSSLLTNFG NDMKFGASPV FPFKFPPLQS AIPCGSFGLN PSQGAMHQSG PIASLVPDLP  660
ISLPYKFRPY PKVPVTGLFD DNHIGKPAGS LQSALSGQRL KQNDMRFLTP KQEQRDDHLY  720
DPCLPVVGPT NASSASIYHH ILGNYPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-33266545878Probable WRKY transcription factor 4
2lex_A5e-33266545878Probable WRKY transcription factor 4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13444SGGGGGEGGGS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018718541.10.0PREDICTED: WRKY transcription factor WRKY24
TrEMBLA0A059D2Y60.0A0A059D2Y6_EUCGR; Uncharacterized protein (Fragment)
STRINGXP_010045965.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM17370611
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.15e-85WRKY DNA-binding protein 2