PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054899.60
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 205aa    MW: 23470.6 Da    PI: 7.303
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054899.60genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.51e-1268120155
                   CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
           HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                   ++++h  +Er+RR+++ + ++ Lr+llP       ++K   ++    A++YI++L+
  EcC054899.60  68 QKKMHRDIERQRRQEMSTLYASLRSLLPLeY---IKGKRATSDHISGAINYISHLE 120
                   6899*************************77...9*******************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.43367119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.24E-1068124No hitNo description
SuperFamilySSF474591.1E-1368139IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.0E-1068120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.1E-1169141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.001273125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006486Biological Processprotein glycosylation
GO:0015992Biological Processproton transport
GO:0055114Biological Processoxidation-reduction process
GO:0009506Cellular Componentplasmodesma
GO:0009507Cellular Componentchloroplast
GO:0016471Cellular Componentvacuolar proton-transporting V-type ATPase complex
GO:0003690Molecular Functiondouble-stranded DNA binding
GO:0008373Molecular Functionsialyltransferase activity
GO:0016491Molecular Functionoxidoreductase activity
GO:0016820Molecular Functionhydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO:0046983Molecular Functionprotein dimerization activity
GO:0071949Molecular FunctionFAD binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MFPLQPNNDL PYLPPNHYPI PEDRIIHHDQ DLLTLCITDR NDENKGLDKS VLISFSRSHK  60
RGADCDPQKK MHRDIERQRR QEMSTLYASL RSLLPLEYIK GKRATSDHIS GAINYISHLE  120
RKIKGLESKR DELKSGNRSA RALSVRPSLD GVEIVIQSTN SSDQDHDFRL SKVLQLLLEE  180
EIGVANCLST RSSEMTFIHT IQSEV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010063759.11e-146PREDICTED: transcription factor bHLH118
TrEMBLA0A059BYH31e-145A0A059BYH3_EUCGR; Uncharacterized protein
STRINGXP_010063759.11e-146(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.13e-33bHLH family protein