PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054909.250
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 224aa    MW: 25853.1 Da    PI: 9.6736
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054909.250genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM113.91.6e-35521813129
            NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka..eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                    pG+rF Ptdeel+ +yLk+kv+g+++++++++++vd++k++P++L  +++ a  + +ewyfF+ rd+ky++g+r nr t sg+Wk++ k+  +l+ 
  EcC054909.250  52 PGLRFIPTDEELILYYLKPKVAGDPIPASNFFADVDLCKFDPRTLIeNRMGAgiDGDEWYFFTLRDRKYRNGSRWNRCTPSGVWKSSRKESVILA- 146
                    9***************************999**************745554433777********************************999999. PP

            NAM  96 kgelvglkktLvfykg.rapkgektdWvmheyrle 129
                    +++++g k++L+f ++ ++++   td  mhey+le
  EcC054909.250 147 ENRTIGYKTSLAFVRNdSKRRRDGTDLNMHEYKLE 181
                    999***********7746666778********985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.03E-4249205IPR003441NAC domain
PROSITE profilePS5100540.08650207IPR003441NAC domain
PfamPF023651.4E-1852180IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001678Biological Processcellular glucose homeostasis
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006413Biological Processtranslational initiation
GO:0006468Biological Processprotein phosphorylation
GO:0007165Biological Processsignal transduction
GO:0008033Biological ProcesstRNA processing
GO:0015074Biological ProcessDNA integration
GO:0046835Biological Processcarbohydrate phosphorylation
GO:0055114Biological Processoxidation-reduction process
GO:0005622Cellular Componentintracellular
GO:0003677Molecular FunctionDNA binding
GO:0003743Molecular Functiontranslation initiation factor activity
GO:0003924Molecular FunctionGTPase activity
GO:0004396Molecular Functionhexokinase activity
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004672Molecular Functionprotein kinase activity
GO:0005506Molecular Functioniron ion binding
GO:0005515Molecular Functionprotein binding
GO:0005524Molecular FunctionATP binding
GO:0005525Molecular FunctionGTP binding
GO:0005536Molecular Functionglucose binding
GO:0008270Molecular Functionzinc ion binding
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016783Molecular Functionsulfurtransferase activity
GO:0020037Molecular Functionheme binding
GO:0050662Molecular Functioncoenzyme binding
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MENNDQSHNR DRDDQGQRKV GVDPCTPSSS QELAVAAVAP PSKAEFPLEN SPGLRFIPTD  60
EELILYYLKP KVAGDPIPAS NFFADVDLCK FDPRTLIENR MGAGIDGDEW YFFTLRDRKY  120
RNGSRWNRCT PSGVWKSSRK ESVILAENRT IGYKTSLAFV RNDSKRRRDG TDLNMHEYKL  180
EEDKKRDRTS IDGKKLDEWV LCKVYTPRHA KQSKNQRRKK AISH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-32322123170NO APICAL MERISTEM PROTEIN
1ut4_B3e-32322123170NO APICAL MERISTEM PROTEIN
1ut7_A3e-32322123170NO APICAL MERISTEM PROTEIN
1ut7_B3e-32322123170NO APICAL MERISTEM PROTEIN
4dul_A3e-32322123170NAC domain-containing protein 19
4dul_B3e-32322123170NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010041962.11e-152PREDICTED: NAC domain-containing protein 67-like
TrEMBLA0A059D9B11e-95A0A059D9B1_EUCGR; Uncharacterized protein
STRINGXP_010041962.11e-151(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.22e-35NAC domain containing protein 47