PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054924.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 259aa    MW: 29112.9 Da    PI: 4.4513
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054924.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.29.1e-302684259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
          WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                  +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d +v+++tY+++Hnh+
  EcC054924.10 26 SDFWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERCKTDASVLVVTYTSTHNHP 84
                  699***********************9988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-311586IPR003657WRKY domain
SuperFamilySSF1182906.93E-262186IPR003657WRKY domain
SMARTSM007741.0E-342585IPR003657WRKY domain
PROSITE profilePS5081130.7792686IPR003657WRKY domain
PfamPF031065.9E-252784IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006508Biological Processproteolysis
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004252Molecular Functionserine-type endopeptidase activity
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
KLVHKTVVRV KIEANVVKQK NEGPPSDFWS WRKYGQKPIK GSPYPRGYYR CSTSKGCSAK  60
KQVERCKTDA SVLVVTYTST HNHPGPDIHS LNPTVQPSEA DDDPEETAVA VAVSPAVSAQ  120
EEVPEQDQED QDQEQHLDLG DKQDRDRHTH VTIDEADRAR EDNFHYLRSP TNCSSQDLVM  180
EQDDTLAPQL QVYEEPLVSC SREDPSGVGA APVPPEPEPE PEEGHDFFDE LEELPAFSYF  240
ANLNRINHFI DDRIPVVPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B8e-2126861779Disease resistance protein RRS1
5w3x_D8e-2126861779Disease resistance protein RRS1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010069834.11e-161PREDICTED: probable WRKY transcription factor 68
TrEMBLA0A059AY081e-160A0A059AY08_EUCGR; Uncharacterized protein
STRINGXP_010069834.11e-161(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM153711117
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.18e-33WRKY DNA-binding protein 35