PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054934.150
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 282aa    MW: 30318.9 Da    PI: 8.0949
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054934.150genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.1e-20131180255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                    +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae+Aa+a++ a++k++g
  EcC054934.150 131 KYRGVRQRP-WGKWAAEIRDPV----KaARVWLGTFETAEGAARAYDVAALKYRG 180
                    8********.**********64....55*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.3E-32130189IPR001471AP2/ERF domain
CDDcd000188.94E-32131190No hitNo description
SMARTSM003801.8E-36131194IPR001471AP2/ERF domain
PROSITE profilePS5103225.791131188IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-23131189IPR016177DNA-binding domain
PfamPF008472.5E-13131180IPR001471AP2/ERF domain
PRINTSPR003671.3E-11132143IPR001471AP2/ERF domain
PRINTSPR003671.3E-11154170IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005975Biological Processcarbohydrate metabolic process
GO:0006260Biological ProcessDNA replication
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006400Biological ProcesstRNA modification
GO:0006468Biological Processprotein phosphorylation
GO:0006511Biological Processubiquitin-dependent protein catabolic process
GO:0007264Biological Processsmall GTPase mediated signal transduction
GO:0016072Biological ProcessrRNA metabolic process
GO:0016579Biological Processprotein deubiquitination
GO:0055114Biological Processoxidation-reduction process
GO:0000287Molecular Functionmagnesium ion binding
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004190Molecular Functionaspartic-type endopeptidase activity
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004672Molecular Functionprotein kinase activity
GO:0004748Molecular Functionribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
GO:0005515Molecular Functionprotein binding
GO:0005524Molecular FunctionATP binding
GO:0005525Molecular FunctionGTP binding
GO:0008080Molecular FunctionN-acetyltransferase activity
GO:0008193Molecular FunctiontRNA guanylyltransferase activity
GO:0008270Molecular Functionzinc ion binding
GO:0036459Molecular Functionthiol-dependent ubiquitinyl hydrolase activity
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MSGLKVADPG DKAPILYPGL DRERETSAMV LALARVVAGE VPGDAEESCP FPFPSGVLRL  60
KRGHGDLSAE PSAEAQLRRA PGRESSVDDA ARGIMEGPSM KTTNHATPTY EYSNSTAAMS  120
MSKYEHQPRR KYRGVRQRPW GKWAAEIRDP VKAARVWLGT FETAEGAARA YDVAALKYRG  180
SRAKLNFPEN VVARLSLAAP PATQMTVPDA ARTHVTVPAD TEHQLASGPD HGCDEWCSWL  240
SPDPDLAHSN LLPSSSSPSS SSSSVSKAAS FAFPTRSGSW PF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-23130191466ATERF1
3gcc_A2e-23130191466ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010025536.10.0PREDICTED: ethylene-responsive transcription factor ERF110
TrEMBLA0A059B8J20.0A0A059B8J2_EUCGR; Uncharacterized protein
STRINGXP_010025536.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.11e-32related to AP2 6l