PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC055015.40
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 438aa    MW: 48576.8 Da    PI: 6.7976
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC055015.40genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.15.1e-10199237745
                   HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                    rr+++NReAAr+sR+RKka+i++Le    +L++  ++L
  EcC055015.40 199 LRRLAQNREAARKSRLRKKAYIQQLESSRMKLSQLEQEL 237
                   69************************9888888777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.8E-4190278IPR004827Basic-leucine zipper domain
CDDcd147081.44E-22197249No hitNo description
PfamPF001703.3E-7198237IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.84E-7199240No hitNo description
Gene3DG3DSA:1.20.5.1702.7E-7200241No hitNo description
PROSITE patternPS000360200215IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.795200239IPR004827Basic-leucine zipper domain
PfamPF141441.5E-31287361IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003690Molecular Functiondouble-stranded DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    Send to blast
MDANKAIITG QHASQLEYPH QHQQHHIQDH GHHHYPHHQQ QQQQVPHGMM QSSPSSSITV  60
NNCLSKDGGG GGGGAYDLGE LDQALFLYLD GHDQNVQDQK QNSGMRPPTL NIFPSQPMHV  120
DPLPKVSMGL ALPQASGSKR PPEPSMELAN ARTEVASAPT EPPKTKREGN RKGASSASEQ  180
QEGPRTPDPK ASVFCMQTLR RLAQNREAAR KSRLRKKAYI QQLESSRMKL SQLEQELQRA  240
RSQGIYVGGG AVVGEQGLPV GISNISTDAA VFDMEYTRWL EEHHRLMCEL RAAVQEHLPE  300
NELRLFVDNT LAHYNEMMNL KSIVAKSDVF HLVSGMWRTP AERCFMWMGD FRPSELIKVV  360
LNHIEPLTEQ QILGICGLQQ STQGGEEALS QGLEALNHSL SETIASDSLI SPPNMANYMG  420
QMAVAMNKLS TLEGFVRQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010057941.10.0PREDICTED: transcription factor TGA2
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A059DI880.0A0A059DI88_EUCGR; Uncharacterized protein
STRINGXP_010057941.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-153bZIP family protein