PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC055085.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 147aa    MW: 17031.5 Da    PI: 9.5867
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC055085.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM69.31e-2171314127
           NAM   4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                    f F+Ptd+el ++yL +++++++l+  +vi+++d+y   ePw++  k   ++ + y F+  +kk  + +r  r++ sg Wk   +  + ++ +g +
  EcC055085.10   7 VFCFQPTDQELFSDYLMRRLNKEPLPDPNVIRDCDVYGGgEPWKIFDK--DRSGKFYVFTVLKKK--NRSRVDRTAGSGSWKGEQS-SDFKDLQGDV 98 
                   589**********************9999********866*****622..233466777777666..578************7765.555555899* PP

           NAM 100 vglkktLvfy.....kgrapkgektdWvmheyr 127
                   +g kk ++f      +++a k ek +W+m ey+
  EcC055085.10  99 IGYKKLFTFKpkagsSAKADKVEKWHWIMYEYS 131
                   **********9877667889999*********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.6134147IPR003441NAC domain
SuperFamilySSF1019416.28E-215132IPR003441NAC domain
PfamPF023652.5E-156131IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MATRHPVFCF QPTDQELFSD YLMRRLNKEP LPDPNVIRDC DVYGGGEPWK IFDKDRSGKF  60
YVFTVLKKKN RSRVDRTAGS GSWKGEQSSD FKDLQGDVIG YKKLFTFKPK AGSSAKADKV  120
EKWHWIMYEY SKHPCNVSVS FPLSLFC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-12613017138Stress-induced transcription factor NAC1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010055621.13e-91PREDICTED: NAC domain-containing protein 68-like isoform X2
RefseqXP_018729435.13e-91PREDICTED: NAC domain-containing protein 68-like isoform X1
STRINGXP_010055621.11e-90(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.17e-14NAC domain containing protein 32