PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC055085.30
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 147aa    MW: 16817.1 Da    PI: 8.8835
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC055085.30genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM73.93.9e-2361313127
           NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                   pGf F+Ptd+el ++yL +++++++l+  +vi+++d+y   ePw++    k +  + y F+  +kk  + +r  r++ sg Wk   +  + ++ +g 
  EcC055085.30   6 PGFCFQPTDQELFSDYLMRRLNEEPLPDPNVIRDCDVYGGgEPWKIFD--KDRGGKFYVFTVLKKK--NRSRVDRTAGSGSWKGEQS-SDFKDLQGD 97 
                   9*************************9999********866*****62..2334466777777666..578************7765.555555899 PP

           NAM  99 lvglkktLvfy.....kgrapkgektdWvmheyr 127
                   ++g kk ++f      +++a k+e+ +W+m ey+
  EcC055085.30  98 VIGYKKLFTFKpkvgsSAKADKAENGHWIMYEYS 131
                   ***********9888778999999*********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.1614147IPR003441NAC domain
SuperFamilySSF1019417.98E-225132IPR003441NAC domain
PfamPF023652.1E-166131IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MATRHPGFCF QPTDQELFSD YLMRRLNEEP LPDPNVIRDC DVYGGGEPWK IFDKDRGGKF  60
YVFTVLKKKN RSRVDRTAGS GSWKGEQSSD FKDLQGDVIG YKKLFTFKPK VGSSAKADKA  120
ENGHWIMYEY SKHPCNVSVS FPLSLFC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-13613017138Stress-induced transcription factor NAC1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010055621.19e-94PREDICTED: NAC domain-containing protein 68-like isoform X2
RefseqXP_018729435.11e-93PREDICTED: NAC domain-containing protein 68-like isoform X1
STRINGXP_010055621.13e-93(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.15e-15NAC domain containing protein 32