PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC055126.50
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 159aa    MW: 17661.6 Da    PI: 7.4561
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC055126.50genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.54.5e-113183557
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57
                  ++ +r+++NRe+ArrsR RK++ ++ L+  v  L +eN +    +    ++  
  EcC055126.50 31 RKRKRMESNRESARRSRMRKQKHLDDLTCQVTRLAKENNQILTGITVAAQHLT 83
                  6789**********************************987766655555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-152791IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.4272992IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.6E-1130105No hitNo description
SuperFamilySSF579593.69E-113181No hitNo description
PfamPF001705.3E-93176IPR004827Basic-leucine zipper domain
CDDcd147023.61E-173282No hitNo description
PROSITE patternPS0003603449IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0015074Biological ProcessDNA integration
GO:0000287Molecular Functionmagnesium ion binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0010333Molecular Functionterpene synthase activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MASSSGNSSS TARLQNSGSE GEPQQLRMDQ RKRKRMESNR ESARRSRMRK QKHLDDLTCQ  60
VTRLAKENNQ ILTGITVAAQ HLTNVESENS ILRAQVTELS HRLDSLNEIL NSIYQSSGTA  120
DADQGLDLCS PYDGFFTSPV NLGCVSHQIM AASDVFECR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13051RKRKRMESNRESARRSRMRKQK
24350RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010061275.11e-114PREDICTED: bZIP transcription factor 44
SwissprotC0Z2L53e-48BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A059BQM51e-112A0A059BQM5_EUCGR; Uncharacterized protein
STRINGXP_010061275.11e-113(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.12e-48basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]