PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC055215.30
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family Dof
Protein Properties Length: 361aa    MW: 39029.2 Da    PI: 8.1021
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC055215.30genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof118.82e-3760119261
        zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                   +ek+l+cprC+s++tkfCyynny+l+qPr++C++C+ryWt+GG++rn+PvG+grrk+k+s
  EcC055215.30  60 PEKILPCPRCNSMDTKFCYYNNYNLNQPRHLCRKCQRYWTAGGTMRNIPVGAGRRKSKNS 119
                   78999****************************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074788.0E-2957117IPR003851Zinc finger, Dof-type
PfamPF027011.0E-3162118IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.06264118IPR003851Zinc finger, Dof-type
PROSITE patternPS01361066102IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
GO:0008168Molecular Functionmethyltransferase activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MNDKYEEGIS CWAADNPKDS AESTIINQKD ETGRETSPPS AQNKEESETS ISRETTLKKP  60
EKILPCPRCN SMDTKFCYYN NYNLNQPRHL CRKCQRYWTA GGTMRNIPVG AGRRKSKNSY  120
AATVAMFHNT GVPESLRADC AGDLKTAGTT ILRFGSDSPN WGQSAAPVPS TINGFLDPGR  180
AIPCSGRGVD NFSDERSCGS SLTASNSTEK ASNCSAPEPA ARNYRGFPLD SVQWNSPTAV  240
STPGFPVSFY QAPQCYWAYA LPGSLPSSLS HGNASTSPPS LTILGKHSRD GNVYDCRATT  300
KQSIIGAREA LDGASDSGES DGFFSQAFQS IAKGKSFNDR RTLLLQANPA ALCRSMNFQE  360
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39660.22e-41cycling DOF factor 2