PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC064565.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 202aa    MW: 22457.4 Da    PI: 9.7706
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC064565.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.71.7e-15158202549
                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                   +r++r++kNRe+A rsR+RK+a+++eLe kv  Le+eN++L+ +l
  EcC064565.10 158 RRQKRMIKNRESAARSRARKQAYTQELEIKVSRLEEENERLRRKL 202
                   79***************************************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.5E-15149202No hitNo description
SMARTSM003382.7E-7154201IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.036156202IPR004827Basic-leucine zipper domain
CDDcd147073.45E-25158202No hitNo description
SuperFamilySSF579592.38E-10158201No hitNo description
PfamPF001706.8E-13158202IPR004827Basic-leucine zipper domain
PROSITE patternPS000360161176IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
KDIQQGEIDD GSNKSKKKKK DSGLGDQDAK PSLGEMTLED FLHKAGVVAE SPVINKNGNH  60
VVDVDSETSG GPQSAQWMHY QLPSVQPQQN VVPVFIPGHH VVQQPVPIIT SPFLDSAFGD  120
AAQMTVSPSS LLCTLSDTPT PGRKRVAPRD VVEKTVERRQ KRMIKNRESA ARSRARKQAY  180
TQELEIKVSR LEEENERLRR KL
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010036426.11e-144PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
SwissprotQ9LES32e-44AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A059A3R71e-143A0A059A3R7_EUCGR; Uncharacterized protein
STRINGXP_010036426.11e-144(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM18842883
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.11e-36ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]