PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC073803.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 96aa    MW: 10498.1 Da    PI: 9.9675
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC073803.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.96.7e-153276655
           AP2  6 VrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                  +  +++  +Wv+eIr+p+    + +r++lg++ t+e+Aa+a++ a+++l+g
  EcC073803.10 32 I--RSRGRKWVSEIREPR----KaTRIWLGTYPTPEMAAAAYDVAALALKG 76
                  5..455567*******94....36************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103218.6241884IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.7E-252885IPR001471AP2/ERF domain
SMARTSM003808.9E-232890IPR001471AP2/ERF domain
CDDcd000181.03E-122986No hitNo description
SuperFamilySSF541712.62E-173086IPR016177DNA-binding domain
PfamPF008479.8E-93476IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    Send to blast
TTMDQHSLLA DASRSPACHP PVSRRHPEYC GIRSRGRKWV SEIREPRKAT RIWLGTYPTP  60
EMAAAAYDVA ALALKGPGAL LNFPSSVLTY PIPVGI
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010038425.12e-59PREDICTED: ethylene-responsive transcription factor ERF027
SwissprotQ9SJR04e-27ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A058ZX416e-49A0A058ZX41_EUCGR; Uncharacterized protein (Fragment)
STRINGXP_010038425.16e-59(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM35528187
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12630.18e-19ERF family protein