PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcC075578.10

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

Nin-like

Protein Properties

Length: 138aa MW: 15648.1 Da PI: 8.2051

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcC075578.10	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	35	2.9e-11	99	132	4	37
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCR 37 +++l d+ yF+lpi++A+ L +c+Tv+K+iC EcC075578.10 99 KMTLADVGGYFHLPIEKASERLHLCPTVVKKICT 132 7999*****************************4 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02042	4.1E-9	99	133	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 138 aa Download sequence Send to blast
MVSHAILDTQ HNPGAVPSNS EDWYQMFDFC KKSIQNVKFI LQQYCEGRRL AGYIMYQDPL 60 AMFYEAVCVG IDFNGNVNAD YFQLPLPPIV SVQRERAGKM TLADVGGYFH LPIEKASERL 120 HLCPTVVKKI CTKRRSGA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018718902.1	9e-73	PREDICTED: protein RKD5 isoform X2
TrEMBL	A0A059AAH1	5e-90	A0A059AAH1_EUCGR; Uncharacterized protein
STRING	XP_010024146.1	8e-84	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM4076	23	42