PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS505229.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 79aa    MW: 9388.9 Da    PI: 11.4288
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS505229.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY40.26.6e-132856232
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT- CS
          WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagC 32
                  +Dgy+WrKYGqK vk+s++pr  Y  t++ C
  EcS505229.10 28 EDGYRWRKYGQKAVKNSPHPR--YATTMPFC 56
                  8********************..66666666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.1E-141252IPR003657WRKY domain
SuperFamilySSF1182901.31E-101949IPR003657WRKY domain
PROSITE profilePS5081113.2762248IPR003657WRKY domain
SMARTSM007744.4E-52764IPR003657WRKY domain
PfamPF031061.3E-82849IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    Send to blast
NKVRRKGQKR IRQPRFAFMT KSEVDNLEDG YRWRKYGQKA VKNSPHPRYA TTMPFCRLNV  60
SYSQFGLLTF SKNLTAFLL
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010066855.15e-27PREDICTED: probable WRKY transcription factor 57 isoform X1
RefseqXP_010066856.15e-27PREDICTED: probable WRKY transcription factor 57 isoform X1
RefseqXP_010066857.12e-27PREDICTED: probable WRKY transcription factor 57 isoform X2
SwissprotQ9C9837e-23WRK57_ARATH; Probable WRKY transcription factor 57
TrEMBLA0A059BFB91e-25A0A059BFB9_EUCGR; Uncharacterized protein
STRINGXP_010066855.12e-26(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM49952753
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.23e-25WRKY DNA-binding protein 57
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Jiang Y,Qiu Y,Hu Y,Yu D
    Heterologous Expression of AtWRKY57 Confers Drought Tolerance in Oryza sativa.
    Front Plant Sci, 2016. 7: p. 145
    [PMID:26904091]
  3. Jiang Y,Yu D
    The WRKY57 Transcription Factor Affects the Expression of Jasmonate ZIM-Domain Genes Transcriptionally to Compromise Botrytis cinerea Resistance.
    Plant Physiol., 2016. 171(4): p. 2771-82
    [PMID:27268959]
  4. Huang KC,Lin WC,Cheng WH
    Salt hypersensitive mutant 9, a nucleolar APUM23 protein, is essential for salt sensitivity in association with the ABA signaling pathway in Arabidopsis.
    BMC Plant Biol., 2018. 18(1): p. 40
    [PMID:29490615]