PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS516652.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 107aa    MW: 12484.2 Da    PI: 9.4988
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS516652.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM47.65.4e-1579534128
           NAM  34 ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                   i e+d+y+ ePw++   + ++e+  y F++ +k+   ++r  r++ sg+Wk++ +  ++ +  gelvg kk++ f  gr +++++ +W+m e+++
  EcS516652.10   7 IVECDLYSQEPWRIF-DT-TSEQTFYVFTTLRKN---KSRVLRTAGSGTWKEQHT-MRIPDILGELVGYKKSFKFQGGRGSSATSGRWIMYEFSM 95 
                   899***********6.32.345667888877664...579***********9877.455555899****************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-17198IPR003441NAC domain
PROSITE profilePS5100519.8131107IPR003441NAC domain
PfamPF023651.3E-71694IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    Send to blast
PLPPGLIVEC DLYSQEPWRI FDTTSEQTFY VFTTLRKNKS RVLRTAGSGT WKEQHTMRIP  60
DILGELVGYK KSFKFQGGRG SSATSGRWIM YEFSMCDERV RFSFHVY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018728632.13e-67PREDICTED: NAC transcription factor 56
RefseqXP_018728633.13e-67PREDICTED: NAC transcription factor 56
TrEMBLA0A059C0V62e-65A0A059C0V6_EUCGR; Uncharacterized protein
STRINGXP_010058220.14e-66(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM13343727
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52890.17e-13NAC domain containing protein 19