PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS519044.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NF-YB
Protein Properties Length: 61aa    MW: 7323.45 Da    PI: 5.7234
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS519044.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB30.11.2e-091247194
         NF-YB 71 latlGfedyveplkvylkkyrele 94
                  +atlGfe+y+eplkvyl++yre+ 
  EcS519044.10  1 MATLGFEEYIEPLKVYLARYREVS 24
                  89********************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.20.101.8E-5123IPR009072Histone-fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 61 aa     Download sequence    Send to blast
MATLGFEEYI EPLKVYLARY REVSYASYLY MTFFYVYKCF SCCDGCLADH QSTRCFREIN  60
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38880.82e-10nuclear factor Y, subunit B1