PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS544861.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 140aa    MW: 15861 Da    PI: 10.0662
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS544861.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.71.2e-132274459
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59
                   k+ +r+ +NRe+ArrsR RK++ +e L++++ +Le eN   ++ ++ +k++v+ +
  EcS544861.10 22 EKKRKRMLSNRESARRSRMRKQKHLEDLTREMGVLEREN---REIIKAYKEKVQDH 74
                  6999***********************************...68889999999865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-101990IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.2312184IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.9E-92163No hitNo description
PfamPF001704.5E-102372IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.37E-102369No hitNo description
CDDcd147023.16E-132463No hitNo description
PROSITE patternPS0003602641IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MMSLTQGSSG SDADARCLGT DEKKRKRMLS NRESARRSRM RKQKHLEDLT REMGVLEREN  60
REIIKAYKEK VQDHLGLQSE NEALLAEKAA LMNQLNGMES MIGSFNKNGP CQRFSSAVQE  120
PWQVHSSSQQ IMASASMSRI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13542RRSRMRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010024787.11e-93PREDICTED: bZIP transcription factor 53
TrEMBLA0A059B5F82e-92A0A059B5F8_EUCGR; Uncharacterized protein
STRINGXP_010024787.14e-93(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM125812231
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.12e-17basic region/leucine zipper motif 53