PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcS553919.10

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

G2-like

Protein Properties

Length: 48aa MW: 5505.31 Da PI: 5.6982

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcS553919.10	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	45.8	1.3e-14	1	28	29	56
G2-like 29 PktilelmkvkgLtlehvkSHLQkYRla 56 Pktil+lm+v+gLtle+v+SHLQ YRl+ EcS553919.10 1 PKTILQLMNVDGLTLENVASHLQEYRLY 28 9*************************85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	3.0E-14	1	32	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.2E-10	1	27	IPR006447	Myb domain, plants
SuperFamily	SSF46689	3.4E-7	1	31	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 48 aa Download sequence Send to blast
PKTILQLMNV DGLTLENVAS HLQEYRLYLQ RMQGPSRGPD ELPSRPLE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010059205.2	2e-25	PREDICTED: uncharacterized protein LOC104447127
Refseq	XP_010059306.2	2e-25	PREDICTED: uncharacterized protein LOC104447241
STRING	XP_010059205.1	1e-24	(Eucalyptus grandis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46640.2	1e-15	G2-like family protein