PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS581349.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 70aa    MW: 8132.26 Da    PI: 3.976
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS581349.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM38.43.9e-12553251
           NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkv 51
                  ++GfrF Pt+eel++ yL+ kv g    +  vi+e+ d y ++PwdLp  +
  EcS581349.10  5 QVGFRFLPTEEELLNGYLTSKVLGYADGC--VIPELdDFYAWDPWDLPGLY 53
                  68***********************9777..8999989*********9433 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100514.843470IPR003441NAC domain
SuperFamilySSF1019411.7E-12459IPR003441NAC domain
PfamPF023653.8E-5647IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 70 aa     Download sequence    Send to blast
MERFQVGFRF LPTEEELLNG YLTSKVLGYA DGCVIPELDD FYAWDPWDLP GLYQREFHAP  60
STFPFILVAV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010026029.11e-18PREDICTED: protein NTM1-like 9
TrEMBLA0A059BCS22e-34A0A059BCS2_EUCGR; Uncharacterized protein
STRINGXP_010041970.15e-32(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM16613212
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.14e-13NAC transcription factor-like 9