PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcS597400.10

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

TCP

Protein Properties

Length: 134aa MW: 14884.5 Da PI: 9.8734

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcS597400.10	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	55.3	2.7e-17	100	134	2	36
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLq 36 ++k+++++++hTkv+gR+RR+R++a+caar+F+L+ EcS597400.10 100 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLT 134 789*******************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	1.2E-12	104	134	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	15.875	106	134	IPR017887	Transcription factor TCP subgroup

Sequence ? help Back to Top
Protein Sequence Length: 134 aa Download sequence Send to blast
IMEGGDHDHF HHHHHHHHHH RRPTFPFQLL EKKEDEQPCS TSNYPSLAMS SDDAPPNPNR 60 SSSTSNTLQI VPAEDQQQQQ QQTLAAAAAG AGAAGAKKPP PKRTSTKDRH TKVDGRGRRI 120 RMPALCAARV FQLT

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010029552.1	1e-58	PREDICTED: transcription factor TCP14
TrEMBL	A0A059D038	3e-57	A0A059D038_EUCGR; Uncharacterized protein
STRING	XP_010029552.1	5e-58	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM3915	27	57

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	2e-20	TCP family protein