PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS636922.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family MYB_related
Protein Properties Length: 184aa    MW: 20357.3 Da    PI: 4.1969
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS636922.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.85e-081232447
                     HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqky 47
                     W++Ia +++ gRt++++k++w++ 
     EcS636922.10  1 WALIAGRLP-GRTDNEIKNYWNTN 23
                     *********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.5E-10124IPR009057Homeodomain-like
CDDcd001671.59E-6124No hitNo description
SuperFamilySSF466892.28E-5127IPR009057Homeodomain-like
PfamPF002496.0E-6124IPR001005SANT/Myb domain
PROSITE profilePS5129413.853128IPR017930Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
WALIAGRLPG RTDNEIKNYW NTNLAKNFGS FSSRSSCKMK FDQDLGVQEY QDHITMNHSP  60
VDPNEPLGIS GIPILKEEEK PLLANESTSF IKNGSNDHGQ DMFSSLLVGD DDDLSFLMSI  120
DTDFGEGVTD FDLQLFRDDQ AAVRQENDDL GIIVSRVDSN DGISSSSLHS SGHDQVKVER  180
GLMS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010034805.11e-131PREDICTED: transcription factor WER
TrEMBLA0A059AHP01e-130A0A059AHP0_EUCGR; Uncharacterized protein
STRINGXP_010034805.11e-130(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM3504822
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.11e-10myb domain protein 5