PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS653286.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family MYB_related
Protein Properties Length: 129aa    MW: 14692 Da    PI: 4.0563
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS653286.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.65.7e-081222446
                     HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqk 46
                     W++Ia +++ gRt++++k++w++
     EcS653286.10  1 WALIAGRLP-GRTDNEIKNYWNS 22
                     *********.***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.1E-10129IPR009057Homeodomain-like
SuperFamilySSF466898.97E-7133IPR009057Homeodomain-like
PROSITE profilePS5129415.82128IPR017930Myb domain
CDDcd001673.65E-5121No hitNo description
PfamPF002491.0E-5122IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    Send to blast
WALIAGRLPG RTDNEIKNYW NSTIKKKMVQ ENGDRPMNSK CEDDQLTKNK PLNETATAES  60
QGDADRESKP CNSEGVVSDR MMESFEEKSQ GGDCQDDTIS WENMMMDLNV EDMCMSENQH  120
SELFEGNED
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010051337.15e-86PREDICTED: transcription factor MYB82
TrEMBLA0A059CUD01e-84A0A059CUD0_EUCGR; Uncharacterized protein
STRINGXP_010051337.12e-85(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2279133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.11e-14myb domain protein 4