PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcS674449.10

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

MYB_related

Protein Properties

Length: 35aa MW: 4497.18 Da PI: 9.8332

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcS674449.10	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.9	9.6e-08	1	32	19	47
TTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 19 lGggtWktIartmg...kgRtlkqcksrwqky 47 +G+g+Wk+I ++ + Rt+ ++k++w++ EcS674449.10 1 FGKGNWKLILHCYRhifEERTEVDLKDKWRNM 32 699***************************95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd11660	1.27E-9	1	34	No hit	No description
PROSITE profile	PS51294	9.401	1	35	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	4.1E-6	1	33	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.13E-9	1	34	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 35 aa Download sequence Send to blast
FGKGNWKLIL HCYRHIFEER TEVDLKDKWR NMNRY

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010031230.2	3e-20	PREDICTED: uncharacterized protein LOC104421078 isoform X1
TrEMBL	A0A059CZJ3	8e-19	A0A059CZJ3_EUCGR; Uncharacterized protein
STRING	XP_010029695.1	2e-19	(Eucalyptus grandis)