PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS699025.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 180aa    MW: 17943.9 Da    PI: 10.6458
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS699025.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.6e-202170255
           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                  +y+GVr ++ +gr++AeIrdp++   + r++lg+f+taeeAa+a++ a++ ++g
  EcS699025.10 21 HYRGVRKRP-WGRYAAEIRDPKK---KSRVWLGTFDTAEEAARAYDSAARDFRG 70
                  7********.**********854...6**********************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.24E-302078No hitNo description
SuperFamilySSF541711.18E-222179IPR016177DNA-binding domain
PROSITE profilePS5103224.212178IPR001471AP2/ERF domain
PfamPF008471.4E-132170IPR001471AP2/ERF domain
SMARTSM003801.8E-392184IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.0E-332178IPR001471AP2/ERF domain
PRINTSPR003679.9E-122233IPR001471AP2/ERF domain
PRINTSPR003679.9E-124460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:0009864Biological Processinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0016604Cellular Componentnuclear body
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MAMKEKAGSG GGNRLAVREA HYRGVRKRPW GRYAAEIRDP KKKSRVWLGT FDTAEEAARA  60
YDSAARDFRG SKAKTNFPLP SERPVLLLAG AAGGAGAGAG AGGGGGKGCN SRSPSQSSTV  120
ESSGHDPAAA AAAAPMVDFS AQLDLNLAYH HGGGGGAGAG AGAGGAVGFR FPHQVAAAGP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-232179564ATERF1
3gcc_A5e-232179564ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00623PBMTransfer from PK19363.1Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010057374.11e-83PREDICTED: ethylene-responsive transcription factor 4
TrEMBLA0A2N9EIY02e-42A0A2N9EIY0_FAGSY; Uncharacterized protein
TrEMBLM1KD436e-42M1KD43_9CARY; Ethylene response factor 1
STRINGXP_010057374.14e-83(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-27erf domain protein 9