PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS701937.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 89aa    MW: 10361.7 Da    PI: 6.5253
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS701937.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM91.71.2e-281288279
           NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk 79
                  ppGfrFhP+deel+ +yL++kv++ +l++  vi+++d+yk++Pw+Lpkk+  +e+ewyfFs+rd+ky++g r+nra++
  EcS701937.10 12 PPGFRFHPSDEELIIHYLQNKVTSLPLPA-PVIADIDLYKYNPWELPKKALFGEDEWYFFSPRDRKYPNGGRPNRAAA 88
                  9***************************9.89***************88888999********************864 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.79E-34787IPR003441NAC domain
PROSITE profilePS5100532.831189IPR003441NAC domain
PfamPF023656.1E-131286IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    Send to blast
MEKESSSTFQ FPPGFRFHPS DEELIIHYLQ NKVTSLPLPA PVIADIDLYK YNPWELPKKA  60
LFGEDEWYFF SPRDRKYPNG GRPNRAAAS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-38289693Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor of the NAC family associated with male fertility. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018724402.15e-60PREDICTED: NAC domain-containing protein 18
SwissprotA2YMR02e-40NAC10_ORYSI; NAC transcription factor ONAC010
TrEMBLA0A059D5503e-56A0A059D550_EUCGR; Uncharacterized protein
STRINGVIT_06s0004g03080.t014e-50(Vitis vinifera)
STRINGEOY330504e-50(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19028276
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.12e-42NAC domain containing protein 32