PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcS702709.10

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

NAC

Protein Properties

Length: 105aa MW: 11900.6 Da PI: 10.7518

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcS702709.10	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	61.1	3.5e-19	3	65	66	128
NAM 66 kkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++a+g r++r++++gyWkatg+ v+s+++e++g+kk++vfy g+ p+g+kt+W ++eyr+ EcS702709.10 3 EREARGGRPSRSMATGYWKATGSAGYVYSSDNEVIGVKKSMVFYVGKPPTGRKTQWKLNEYRA 65 5678899******************************************************95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	21.937	1	94	IPR003441	NAC domain
SuperFamily	SSF101941	2.75E-19	4	70	IPR003441	NAC domain
Pfam	PF02365	1.2E-7	9	64	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 105 aa Download sequence Send to blast
MQEREARGGR PSRSMATGYW KATGSAGYVY SSDNEVIGVK KSMVFYVGKP PTGRKTQWKL 60 NEYRAFELSP TIPNSTSNNI SIPKVNVLSR IWTFLSTFTN MERIK

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	5e-14	8	69	86	146	NO APICAL MERISTEM PROTEIN
1ut4_B	5e-14	8	69	86	146	NO APICAL MERISTEM PROTEIN
1ut7_A	5e-14	8	69	86	146	NO APICAL MERISTEM PROTEIN
1ut7_B	5e-14	8	69	86	146	NO APICAL MERISTEM PROTEIN
3swm_A	4e-14	8	69	89	149	NAC domain-containing protein 19
3swm_B	4e-14	8	69	89	149	NAC domain-containing protein 19
3swm_C	4e-14	8	69	89	149	NAC domain-containing protein 19
3swm_D	4e-14	8	69	89	149	NAC domain-containing protein 19
3swp_A	4e-14	8	69	89	149	NAC domain-containing protein 19
3swp_B	4e-14	8	69	89	149	NAC domain-containing protein 19
3swp_C	4e-14	8	69	89	149	NAC domain-containing protein 19
3swp_D	4e-14	8	69	89	149	NAC domain-containing protein 19
4dul_A	5e-14	8	69	86	146	NAC domain-containing protein 19
4dul_B	5e-14	8	69	86	146	NAC domain-containing protein 19
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010034216.1	3e-53	PREDICTED: NAC domain-containing protein 90
Swissprot	Q9M290	7e-31	NAC61_ARATH; Putative NAC domain-containing protein 61
TrEMBL	A0A059A9T4	7e-52	A0A059A9T4_EUCGR; Uncharacterized protein
STRING	XP_010034216.1	1e-52	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM1445	28	93

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G44350.1	3e-33	NAC domain containing protein 61