PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS702777.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 126aa    MW: 13523.2 Da    PI: 10.4519
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS702777.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.41.1e-1092126241
           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaee 41 
                    y+G+r  +++g+Wv+eIr+p++   ++r++lg++ t+e+
  EcS702777.10  92 FYRGIR--SRSGKWVSEIREPRK---TTRVWLGTYPTPEM 126
                   69***6..678*********843...5**********996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.57E-792126IPR016177DNA-binding domain
SMARTSM003800.002692126IPR001471AP2/ERF domain
PROSITE profilePS5103212.82692126IPR001471AP2/ERF domain
PfamPF008472.1E-493126IPR001471AP2/ERF domain
CDDcd000181.59E-1393126No hitNo description
Gene3DG3DSA:3.30.730.108.1E-1493126IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    Send to blast
MSDPSSPKDE AHVVQSSAEL DPPPPQPLPS PSPPPPPPLA LHALDQTLHS LPAYAGDAPS  60
PKGKSPSPRH LQRSSPRSNP SGSASSGGKH PFYRGIRSRS GKWVSEIREP RKTTRVWLGT  120
YPTPEM
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010054789.11e-79PREDICTED: ethylene-responsive transcription factor ERF025
TrEMBLA0A059CI542e-78A0A059CI54_EUCGR; Uncharacterized protein
STRINGXP_010054789.14e-79(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19572777
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.14e-19ERF family protein