PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS715794.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family C2H2
Protein Properties Length: 97aa    MW: 11058.7 Da    PI: 8.9851
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS715794.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.98.4e-065070121
                  EEETTTTEEESSHHHHHHHHH CS
       zf-C2H2  1 ykCpdCgksFsrksnLkrHir 21
                  +kC+ Cg  F+ +s+L+ H++
  EcS715794.10 50 FKCERCGAAFNLNSELREHQM 70
                  89*****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576674.58E-62670No hitNo description
Gene3DG3DSA:3.30.160.601.2E-55069IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015710.9285079IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    Send to blast
SFSISPDSAL PQSILFSSIM PKTTEACTYS GCWKNGLRHH TKAVHYKTRF KCERCGAAFN  60
LNSELREHQM WISRRGWSPP SMMAAILIYL ADLETTF