PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS722467.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 170aa    MW: 19279.5 Da    PI: 4.2413
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS722467.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2431.1e-13133169140
           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtae 40 
                   ++y+GVr+++ +g+++Ae rdp++ng  +r++lg++ t+e
  EcS722467.10 133 THYRGVRRRP-WGKYAAEMRDPKKNG--ARIWLGTYETPE 169
                   68********.***********9998..**********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.05E-16133170No hitNo description
PfamPF008472.4E-8133169IPR001471AP2/ERF domain
PROSITE profilePS5103216.66134170IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.5E-17134170IPR001471AP2/ERF domain
SMARTSM003802.7E-7134170IPR001471AP2/ERF domain
SuperFamilySSF541715.89E-12134170IPR016177DNA-binding domain
PRINTSPR003671.9E-8135146IPR001471AP2/ERF domain
PRINTSPR003671.9E-8158170IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MLQEIFGPFE TDPCDALKSI CQHLLEEDDD DDAVNAAFST QTPANICRRC SSFSNLLLLE  60
SWSEVPLKVD DSEDMVVYSA LRDALNSGWT VPLASSQELD FEVTTIDYNS VGLATEEKQE  120
TVEREVQVPV KKTHYRGVRR RPWGKYAAEM RDPKKNGARI WLGTYETPED
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-18130170141ATERF1
3gcc_A7e-18130170141ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018732518.15e-97PREDICTED: ethylene-responsive transcription factor 13
TrEMBLA0A059BAV25e-77A0A059BAV2_EUCGR; Uncharacterized protein
STRINGXP_010067932.11e-111(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.12e-38ethylene-responsive element binding factor 13